online calculation of the information content or the relative entropy within sequence alignment blocks
Zuegge, J., Ebeling, M., Schneider, G., (2001) H-BloX: visualizing alignment block entropies. J. Mol. Graph. Model., 19 (3-4), 303.
Please cite, when your research makes use of this software.
A Mathematical Theory of Communication by Claude E. Shannon This is a very fundamental paper on information theory by Shannon himself.
Information Theory Primer of T. D. Schneider This is a little easier to read and it covers some biological aspects of information theory.
Baldi ,P. and Brunak, S. (1998) Bioinformatics - The Machine Learning Approach. MIT Press, Cambridge, USA.
Durbin, R., Eddy, S., Krogh, A. and Itchinson, G., (1998) Biological Sequence Analysis: Probabilistic models of Proteins and Nucleic Acids. Cambridge University Press, Cambridge, UK.
Engelman, D.M., Steitz, T.A. and Golman, A. (1986) Identifying nonpolar transbilayer helices in amino acid sequences of membrane proteins. Annu. Rev. Biophys. Biophys. Chem., 15, 321.
If you have any questions, comments or ideas about this site, please do not hesitate to contact Jochen Zuegge